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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947984.1_cds_XP_016489411.1_79935
CDS Infomation

[gene=LOC107809323] [db_xref=GeneID:107809323] [protein=probable serine/threonine-protein kinase abkC] [protein_id=XP_016489411.1] [location=complement(join(25453..25572,25693..25848,27267..27536,28484..29816,31230..31237))] [gbkey=CDS]
Sequence

ATGTCAAGATTCTTTAGAATTGGTAGTATTAAAAGAATTGTTCAATCCCTTGAAAAAAGT
CAGAGAAGTGTCTATTCAGGAGAGAAACACGGATTGCTTCTTAGGGTTGGGATATGTTCT
TCTCGATACAGATATTATGGGCAATACACATCTTCCTCTAGAGGATATGCTTCATTTACT
GGGTACAGATTGCAAAATGGTGTCTATAACAATTTTCACAAGATACAGTCAGCCACTTCA
TCAAGTAATTCTAAATTACATCACGCCCGACTTGCTTGGAAGAGGTTCTTGCTGAATTCT
TTGTACAAGGGAAGAACTTTTGTTCCACTTAGTAGAGTTGCTCAAGCGGTTAGTTTGGCC
TTGTGCCGCTCTGCCGTTGTTGTTCCTGGTATATTTGCCTTAACATGTAGAAAAAATGTA
GCAGTCGCAGAAGCTCTGCCAGATATGGACCTTTCCCCGCCAAGGAATTCTTTTTATCTA
CGTGCACAAAATTGTCATGCTTTATTTACTCGAGTAATCCTTTCAGCATTTGAAGGTGCT
ATTCTTTTGGTGAGAGCTTTTTATTTGGCAATCCTGTTTTCTCCAAGCATAGCAATGGCT
CCATTTGCAGAAGTTCTGGGACCTAGGTTCAGGAAAATATGGCTTCAGGTTGTTCACCGG
ACTCTTGAAAGAGCAGGTCCAGCATTTATAAAATGGGGCCAATGGGCGGCTACACGGCCA
GATCTGTTCCCAAGAGACTTGTGTGCTGAGTTGTCAAAGCTTCACTCGAAAGCCCCTGAA
CATAGCTTTGCCTACACGAAAAAAGTTGTTGAAAAAGCTTTTGGTCGCAAGCTTTCGGAG
ATTTTTGATGAGTTTGAGCAGACCCCTGTAGCATCTGGAAGTATCGCTCAAGTGCATCGT
GCTTCCTTGAAGTATAGATACCGTGGTCGAGAGATCAAACCTATAAAAGTGGCAGTGAAG
GTTAGACACCCTGGAGTTGGTGAATCAATTCGAAGAGACTTTGAGATTATCAATGTCGTT
GCAAAAATATCAGGGTTCATACCATCACTTAAGTGGCTTAGATTGGAGGAAAGTGTCCAG
CAATTTGCTGTCTTTATGATGTCACAAGTTGACCTTGCAAGAGAAGCTGCCCATCTAAGT
CGTTTTATTTATAATTTTCGGAGATGGAAAGACGTCTCTTTCCCTAAGCCTGTTTATCCT
TTAGTACATCCTGCTGTGTTGGTGGAAACTTTTGAGGAAGGTGAAAGTGTCGCCCACTAT
GTTGATGAACTCGTGGGTCACGAACGACTTAAGAGTGCTCTTGCTCATATCGGGACTCAT
GCACTTCTCAAGATGCTTCTGGTTGACAACTTTATGCATGCTGACATGCATCCAGGAAAT
ATTCTTGTCCGTGTACCACAGCATAAATCCTCTCGGAAACGTATATTCAAGTCAAAGCCC
CATGTGATTTTCCTCGATGTAGGCATGACTGCTGAACTTTCTCAGAACGACAAGCTGAAT
TTGCTTGAATTCTTTAAGGCTGTTGCTCGTCGAGATGGTATGACTGCAGCTCAGTGCACT
TTAAATCTGTCAAAGAAGCAGAACTGCCCTGATCCTGATGCCTTCATTAAGGAAGTGAAA
GAATCTTTCGACTTTTGGGGGACTCCAGAAGGAGATTTAGTCCATCCTGCGGACTGTATG
ATGCAACTACTTGAACAAGTTAGGCGTCACAGAGTTAACATTGACGGCAATGTGTGCACC
GCTATGGTGACAACTTTAGTCTTGGAGGGTTGGCAGCGGAAACTTGATCCTGATTATAAT
ATAATGCACACGCTACAGACGTTGCTTCTTAAAGCCGACTGGGCAAAGGATCTTTCCTAT
ACAATTGAGCAGCTCATGGCTCCATGA

Peptide Sequence

PEP ID

XP_016489411.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase abkC [Nicotiana tabacum]
Sequence

MSRFFRIGSIKRIVQSLEKSQRSVYSGEKHGLLLRVGICSSRYRYYGQYTSSSRGYASFT
GYRLQNGVYNNFHKIQSATSSSNSKLHHARLAWKRFLLNSLYKGRTFVPLSRVAQAVSLA
LCRSAVVVPGIFALTCRKNVAVAEALPDMDLSPPRNSFYLRAQNCHALFTRVILSAFEGA
ILLVRAFYLAILFSPSIAMAPFAEVLGPRFRKIWLQVVHRTLERAGPAFIKWGQWAATRP
DLFPRDLCAELSKLHSKAPEHSFAYTKKVVEKAFGRKLSEIFDEFEQTPVASGSIAQVHR
ASLKYRYRGREIKPIKVAVKVRHPGVGESIRRDFEIINVVAKISGFIPSLKWLRLEESVQ
QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETFEEGESVAHY
VDELVGHERLKSALAHIGTHALLKMLLVDNFMHADMHPGNILVRVPQHKSSRKRIFKSKP
HVIFLDVGMTAELSQNDKLNLLEFFKAVARRDGMTAAQCTLNLSKKQNCPDPDAFIKEVK
ESFDFWGTPEGDLVHPADCMMQLLEQVRRHRVNIDGNVCTAMVTTLVLEGWQRKLDPDYN
IMHTLQTLLLKADWAKDLSYTIEQLMAP

Transcript Sequence

Gene sequence data has not been registered.